The Darwin Trilogy The Principles and Practice of Integrative Medicine Majid Ali, M.D. Coming 2009

 

Majid Ali, M.D.

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Editor, The Journal of Integrative Medicine
Formerly, Associate Professor of Pathology (adj.), College of Physicians
and Surgeons of Columbia University, NY
Formerly, President of Staff and Chief Pathologist, Holy Name Hospital, Teaneck, NJ

Fellow, Royal College of Surgeons of England - Diplomate,
American Board of Anatomic and Clinical Pathology
Diplomate, American Boards of Environmental Medicine
Past
President Capital University of Integrative Medicine

Darwin, Dysox, and Our Fermenting Planet
Introduction to Darwin and Dysox Trilogy

No simplicity in clinical medicine—in my view—is as compelling as the simplicity of the "dysox model of disease," described and illustrated in the Darwin and Dysox Trilogy (the tenth, eleventh, and twelfth volumes of The Principles and Practice of Medicine). No simplicity allows me to more effectively cope with so many complexities of caring for ill individuals as the simplicity of three primary homeostatic mechanisms governed by oxygen: acid- base balance, redox regulation, and clotting-unclotting equilibrium (see chapter 2 entitled "Oxygen Homeostasis—Oxygen's Three-Legged Throne Model and The Sun-Soil Strategy for Healing" for details). In 1998, I introduced the term
dysoxygenosis ("dysox" for short) for the states of respiratory-to-fermentative shift in ATP generation and disrupted oxygen signaling.1-3 The core significance of the dysox model of disease is: All  issues related to oxygen homeostasis must be diligently considered in caring for an ill individual regardless of the diagnostic rubric.

The great value of Darwin's seminal tenets of ecologic connectivity and natural selection is that in biology so little explains so much.  The core importance of the dysox model of health and disease—in my view—is also that in clinical medicine so little explains so much. Darwin's theory of the origin of species continues to be rejected by some because they fail to see the range and rates of transition in the evolution of species. The significance of dysox is also not recognized by many clinicians because they fail to see the range and rates of transition in the evolving patterns of disrupted oxygen signaling and the respiratory and fermentative modes of cellular energetics in the evolution of various stages and forms of illness. I devote the  Trilogy to an in-depth treatment of these crucial issues and related subjects.

Ecologic Thinking in Medicine

Darwin's essential message for biologists is that no part can be understood without understanding its relationships with the whole. The essential significance of the dysox phenomenon for physicians is that it explains foundational relationships between cellular injury and adverse effects of nutritional, environmental, and stress- related factors. I illustrate these crucial concepts with some clinical examples. A cardiologist prescribes Inderal for tachycardia. A dermatologist administers steroids for eczema. A neurologist uses Zomig for headache. A gastroenterologist treats gastroesophageal reflux disorder (GERD) with Nexium. How does Darwin inform these specialists? What should the phenomenon of dysox mean to them?

We doctors have not been ecologic thinkers. Darwin invites us to become clinical ecologists and understand how environmental, dietary, and stress-related triggers cause various symptom-complexes. In caring for chronically ill individuals, the dysox model of disease  shifts the focus from the diagnostic terms chosen for them to detecting and addressing  all factors that put oxygen homeostasis in jeopardy. It offers cardiologists, dermatologists, neurologists, and gastroenterologists not only a clear scientific basis of those relationships but also provides sound scientific basis of alleviating suffering and restoring health.  These simple ideas call for a radical re-thinking of the prevailing medical philosophy.

Clinical Research

Who determines the long-term relative safety and efficacy of a drug—professors in medical schools or clinicians in the trenches of illness? Both groups know the answer. Clinicians focus on their patients as a community of suffering people as individuals and commonly address concurrent problems. Professors focus on a single drug made by a pharmaceutical company who pays for their "research." Some decades ago, I recognized a dire need for an integrative model of clinical research, in which teams of integrative clinicians, without any financial conflicts, collectively and openly, care for a large number of unselected patients with specific disorders, diligently maintaining detailed records. The outcome data are then published in-toto showing the clinical efficacy or inefficacy of the integrative management protocols. I wrote the Darwin and Dysox Trilogy to fulfill that need. The readers will recognize that these studies demonstrate the philosophy, principles, and practice of integrative medicine discussed at length in these and other volumes of this textbook.

What Is Integrative Medicine

Integrative medicine is not, as many ill-informed doctors assert, "popping vitamins pills" to treat non- existent problems. Rather, it is taking individuals with serious subacute and chronic diseases—Crohn's colitis, lupus, rheumatoid arthritis, early stages of renal failure, Hashimoto's disease, multiple sclerosis, amenorrhea, and others—and returning them to good health in six to twelve months. In integrative medicine, this objective is achieved as patients are safely weaned off their drugs with nutrient, environmental, and self-regulatory measures. The readers will find in the Trilogy ample documentation of this. Integrative medicine is a philosophy, not preoccupation with vitamin D, zinc, co-enzyme Q10, magnesium, or any other nutrient.

Ethics in Medicine

Ethics, simply stated, is the study of the consequences of one's actions on others. Ethics is also the study of the consequences of one's failure to take the needed action on others. For example,  it is clearly unethical for a nurse not to give a patient the prescribed medication. The relevance and significance of no action by a doctor, when action is required, is self-evident. It is clearly unethical when a doctor fails to do the necessary detective work to uncover the substances and/or elements that cause or contribute to the illness of a patient. In this light, how ethical is the use of Inderal for tachycardia without searching for and addressing the environmental, nutritional, and stress-related factors that create adrenergic hypervigilence?  How ethical is the use of steroids for eczema while neglecting the underlying causes of mold allergy, mycotoxicosis, and adverse food responses? How ethical is the use of Zomig for headache without a diligent search for causes of headache? How ethical is the use of Nexium for blocking the acid pump when the real problem is gastroparesis? Indeed, is it ethical for any doctor to suppress symptoms with drugs without addressing the primary mechanisms of molecular and cellular injury: disruption of oxygen signaling and respiratory-to-fermentative shift resulting from impaired mitochondrial function. Is it ever ethical for a doctor to ignore the adverse effects of altered gut microbiota, impaired hepatic detoxification pathways, and environmental pollutants—industrial toxins, heavy metals, mycotoxins, and others—before prescribing any drug for a chronic disorder?

Humans Are Not the Apical Predators


Darwin and the dysox phenomenon have other important messages for physicians. Biology is an equalizer. We humans position ourselves at the top of the food chain and exult in that delusion. I do not see a food chain, only a food cycle in nature in which every species is both a predator and prey—in the eternal predator-prey dance of life and death, the predator often becomes a prey and the prey a predator. The human cells sometimes destroy invading microbes, and are sometimes killed by them.  Based on extended clinical experience, morphologic observations, and biochemical findings in patients with diverse clinical disorders, I consider mold allergy, overgrowth of yeast species in the bowel, and mycotoxicosis to be the most significant threats to human health. The dysoxic effects of these factors—compounded by those of toxic metals and synthetic chemicals— contribute significantly to the pathogenesis of autoimmune, environmental, degenerative, and neoplastic disorders. So, these "lowly" oxyphobic microbes  can hardly be relegated to the bottom of the so-called food chain.  Nor can humans be assigned the top position. I cite the case of Staphylococcus aureus to support my larger point here. In 1958, I learned that S. aureus was a nuisance, present on the skin of up to 40% of healthy individuals. In 2008, I learned that the microbial species killed more citizens of the United States than the HIV/AIDS complex.11

Dysox and Climatic Chaos: A Fermenting Planet Cannot Sustain Healthy Humans

Times are desperate for most forms of life on the planet Earth. In considering the predicted climatic changes, the focus is always on carbon issues, and oxygen-related issues are completely ignored. This, in my view, is a serious mistake. In reality, the biologic consequences of the oxygen-related issues (the "oxygen issues") are far more important. Below is text from my three-part article on the subject entitled "Dysox and Climatic Chaos: The Primacy of Oxygen Issues Over Carbon Issues.5"

Butterflies, bees, and bats are disappearing with accelerating rates.6-8 Before the fall of these flyers, we witnessed large-scale extinction of amphibian species.9,10 The world's best scientific sleuths used their best diagnostic technologies to uncover the underlying causes in fungi, viruses, pesticides, industrial pollutants, habitat destruction, and climatic changes. No specific cause was identified in any case. None of the investigators recognized the obvious: disruption of oxygen signaling and blockade of oxygen-driven bioenergetics caused by the cumulative effects of multiple oxygen disruptors—as is the case in all human deaths regardless of the initiating and complicating factors.... The fundamental bioenergetics of butterflies, bees, and bats involve coupling of respiration with oxidative phosphorylation and mitochondrial ATP generation. Except during hibernation, the mitochondrial dynamics in these species are essentially identical to those of humans. In health, the products of  metabolism of carbohydrates, fats, and proteins enter the Krebs cycle and, under optimal conditions, are broken down completely into water and carbon dioxide to  generate "clean" energy.  When the Krebs cycle is unimpeded, all of its intermediates (organic acids) are broken down to produce ATP (citations renumbered from the publications).

As for oxygen-utilizing life forms, in my view, the planet Earth is fermenting. This view of dysox is a strong explanatory power not only for butterflies, bees, and bats, but also for humans.

The Future of Humankind Is Not a Zero-sum Game

In the context of the predicted climatic chaos, Darwin's message is:  a gain of one people must not be equated with the loss of another—the future of humankind is not a zero-sum game. Nationalistic agendas for coping with projected climatic changes will not only be ineffective but also divisive and counterproductive. Humankind now faces different problems. If relentless global chemicalization, poisoning of human habitat, and fermenting of the planet continue unabated—global warming, without doubt, will explode the scale of oxygen crises—the threat to human health and survival will increase exponentially. Charles Robert Darwin developed his central ideas of ecologic connectivity and natural selection to define his theory of origin of species. Herbert Spencer hijacked that idea and introduced the expression survival of the fittest to advance his social manifesto—an unfortunate choice of words that fostered self-centeredness, abuse of power by the spiritually sclerosed, and oppression of people. Humankind now faces different problems. If predictions about the looming climatic chaos are realized—evidence to the contrary is non-existent—there will not be a "fittest" left among us. What poisons some now will poison all with time. Is there a more compelling reason in support of the core notion of  oneness of the human species—and, by extension, oneness of all planetary life? Is there a more cogent and forceful argument for accepting and fostering this notion of a shared planet? We physicians have important roles to play in the great environmental and social issues of our time. The Darwin and Dysox Trilogy is my attempt to engage that dialogue as well.

A fermenting planet cannot sustain healthy life.

References

1. Ali M: Darwin, oxidosis, dysoxygenosis, and integration. J Integrative Medicine 1999;3:11-16.
2. Ali M: Fibromyalgia: an oxidative-dysoxygenative disorder (ODD). J Integrative Medicine 1999; 3:17-37.
3. Ali M: Under Darwin's Glow (editorial).  J Integrative Medicine 1999. 3:1
4. Ali M. Ali M. Oxygen and Aging. (Ist ed.) New York, Canary 21 Press. Aging Healthfully Book 2000.
5. Ali M. Dysox and Climatic Chaos -  The primacy of oxygen issues over carbon issues. Part  II. Townsend Letter-The examiner of Alternative
    Medicine. 2008;300:121-124.
6. Mallet  JL,  Longino  JT, Murawski  D, et al. Handling effects in Heliconius: Where do all the butterflies go? J. Anim. Ecol. 1987;56, 377:386.
7. Watanabe M. Pollination worries rise as honey bees decline. Science. 1994;265:1170. 
8. Tuttle  MD. How North America's Bats Survive the Winter.  http://www.batcon.org/ batsmag/v9n3-2.html.
9. Bickler PE,  Buck LT. Hypoxia Tolerance in Reptiles, Amphibians, and Fishes: Life with Variable Oxygen Availability. Annual Review of Physiology. 2007; 69:145-170.
10. Becker, Habitat Split and the Global Decline of Amphibians. Science. 2007;318: 1775-1777.
11. Sack K. Deadly bacteria found to be more common. The New York Times. October 17, 2007.
 

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